Chapter category: Cell Metabolism
Role of Coenzyme F430 in Methanogenesis
Tetrapyrroles: Birth, Life and Death
Edited by: Martin J. Warren and Alison G. SmithISBN: 978-0-387-78517-2
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Chapter authors:
Evert C. Duin
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Additional chapters from this book:
Phytochromes: Bilin-Linked Photoreceptors in Bacteria and Plants
Matthew J. Terry and Alex C. McCormac
The phytochromes and related prokaryotic photoreceptors utilise a linear tetrapyrrole chromophore to monitor the surrounding light environment. They are found in most photosynthetic organisms, and als...
The Role of Siroheme in Sulfite and Nitrite Reductases
M. Elizabeth Stroupe and Elizabeth D. Getzoff
Sulfite and nitrite reductases (SiRs/NiRs) use siroheme, an iron-containing isobacteriochlorin, alongside a [4Fe-4S] cluster to perform the six-electron reduction of sulfite to sulfide or nitrite to...
Regulation of the Late Steps of Chlorophyll Biosynthesis
Wolfhart Ruediger
The regulatory network that controls formation of the various components of the photo- synthetic machinery becomes evident when late steps of chlorophyll biosynthesis are investigated by deregula...
Regulation of Mammalian Heme Biosynthesis
Amy E. Medlock and Harry A. Dailey
Regulation of the heme biosynthetic pathway in mammals occurs via two distinct mechanisms. These mechanisms reflect the fact that while most cells need to closely regulate relatively low level...
Coenzyme B12-Catalyzed Radical Isomerizations
Dominique Padovani and Ruma Banerjee
Cobalamins are complex organometallic cofactors essential for catalysis in three enzyme families, the isomerases, methyltransferases and reductive dehalogenases. This account focuses on the isom...
The Regulation of Cobalamin Biosynthesis
Jeffrey G. Lawrence
Expositions on the regulation of biochemical pathways usually succeed in disappointing at least half of their potential audience. From a holistic standpoint, one could view gene regulation as th...
Tetrapyrroles in Photodynamic Therapy
David I. Vernon and Ian Walker
The destructive photosensitising ability of porphyrins in patients suffering from porphyria has been well documented. Patients with those porphyrias that accumulate high levels of porphyrins i...
Synthesis and Role of Bilins in Photosynthetic Organisms
Nicole Frankenberg-Dinkel, and Matthew J. Terry
Bilins are linear tetrapyrroles that function as the chromophores of the light-harvesting phycobiliproteins and light-signalling phytochromes in photosynthetic organisms. The biosynthesis of bil...
Heme Degradation: Mechanistic and Physiological Implications
Angela Wilks
Heme oxidation catalyzed by heme oxygenase has evolved to carry out a number of important and diverse physiological processes including iron reutilization and cellular signaling in mammals, synth...
Novel Heme-Protein Interactions: Some More Radical Than Others
Ann Smith
Heme (iron-protoporphyrin IX), as well as being an essential cofactor for cytochromes, oxidases and oxygen-binding proteins, is an important biological regulator acting via noncovalent, reversib...
Biosynthesis of 5-Aminolevulinic Acid
Dieter Jahn and Dirk W. Heinz
5-Aminolevulinic acid (ALA) is the general precursor of all known tetrapyrroles. Currently, two different biosynthetic routes for ALA formation are known. Humans, animals, fungi and the a-group ...
An Historical Introduction to Porphyrin and Chlorophyll Synthesis
Michael R. Moore
Porphyrins are the extroverts of chemistry. Bright purple and fluorescent, they are used biologically in the processes of energy capture and utilization. Porphyrins are the key to life. It has b...
The Role of Heme d1 in Denitrification
Stuart J. Ferguson
Heme d1 is found only in a bacterial periplasmic enzyme, cytochrome cd1, that catalyses reduction of nitrite to nitric oxide. The unique features of the d1 heme include saturation of two of the ...
Conversion of Cobinamide into Coenzyme B12
J.C. Escalante-Semerena, J.D. Woodson, N.R. Buan and C.L. Zayas
Cobamides are unique cyclic tetrapyrroles because their structures include an upper (Cob) and a lower (Coa) axial ligand. The Coa and Cob igands are important for the interaction of the cobamide...
Biosynthesis of Chlorophyll and Bacteriochlorophyll
Derren J. Heyes and C. Neil Hunter
The (bacterio)chlorophyll biosynthetic pathway is of profound importance to the biosphere. During the past 20 years, there have been major advances in the under standing of the genes involved i...
Inherited Disorders of Haem Synthesis: The Human Porphyrias
Michael N. Badminton and George H Elder
The porphyrias are inherited metabolic disorders resulting from partial deficiency of enzymes of the haem biosynthetic pathway. Each particular enzyme deficiency gives rise to increased levels o...
Heme Transport and Incorporation into Proteins
Linda Thöny-Meyer
Heme proteins are located in different compartments and organelles of pro- and eukaryotic cells. For their biosynthesis and assembly heme needs to be delivered to the polypeptides at the corre...
Chlorophyll Breakdown
Bernhard Krautler
Chlorophyll metabolism is probably the most visible manifestation of life. In spite of its obvious ecological importance, chlorophyll catabolism has remained an enigma until about twelve years a...
5-Aminolaevulinic Acid Dehydratase, Porphobilinogen Deaminase and Uroporphyrinogen III Synthase
Heidi L. Schubert, Peter T. Erskine and Jonathan B. Cooper
The three enzymes 5-aminolaevulinic acid dehydratase (ALAD, E.C.4.2.1.24; sometimes referred to as porphobilinogen synthase), porphobilinogen deaminase (EC 4.3.1.8; also known as hydroxymethylbilane s...
Regulation of Tetrapyrrole Synthesis in Higher Plants
Matthew J. Terry and Alison G. Smith
Regulation of the tetrapyrrole pathway in plants is particularly crucial, since it is required for efficient synthesis of the photosynthetic apparatus, protection from the harmful phototoxicit...
Transformation of Uroporphyrinogen III into Protohaem
Johanna E. Cornah and Alison G. Smith
Haem is an essential cofactor for virtually all organisms. It is made from the common tetrapyrrole progenitor, uroporphyrinogen III, by four sequential enzymes: uroporphyrinogen III decarboxylase, cop...
Role of Coenzyme F430 in Methanogenesis
Evert C. Duin
Methane production by methanogenic archaea takes place in many anaerobic microbial habitats such as swamps, rice paddies, fresh water sediments and the intestinal tract of animals and insects. A...
Vitamin B12; Biosynthesis of the Corrin Ring
Ross M Graham, Evelyne Deery and Martin J. Warren
Vitamin B12 is a cobalt?containing modified tetrapyrrole, whose structural complexity and beguiling chemistry has fascinated scientists for over 80 years. As with all modified tetrapyrroles, its s...
Heme and Hemoproteins
Andrew W. Munro, Hazel M. Girvan, Kirsty J. McLean, Myles R. Cheesman and David Leys
Heme cofactors are found in a wide range of proteins, where they play various roles in e.g., steroid1 and bioactive lipid synthesis,2 energy transduction,3 gene regulation,4 cellular signaling,5...
Biosynthesis of Siroheme and Coenzyme F430
Martin J. Warren, Evelyne Deery and Sarah R. Rose
The biosynthesis of siroheme from uropoprhyirnogen III in bacteria, yeasts and plants is described. The pathway requires the bis-methylation of uroporphyrinogen III to gener- ate precorrin-2, whi...

