Chapter category:
Whole Cell Modeling—Fundamental Basis and Applications
E-Cell System: Basic Concepts
and Applications
Edited by: Satya Nanda Vel Arjunan, Pawan K. Dhar and Masaru TomitaISBN: TBA
» Get more information about this book at landesbioscience.com «
Chapter authors:
Pawan Dhar
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Pawan Dhar
Bioinformatics Institute, Singapore
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Additional chapters from this book:
Distributed Cell Biology Simulations with the E‑Cell System
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Analytical techniques in computational cell biology such as kinetic parameter estimation, Metabolic Control Analysis (MCA) and bifurcation analysis require large numbers of repetitive simulation runs ...
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The thorough overview of the E‑Cell Simulation Environment in this chapter provides a foundation for understanding the systems biology research that uses the E‑Cell Simulation Environment ...
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Simulation of Human Erythrocyte Metabolism
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Since a mature mammalian erthrocyte is enucleated and it is void of mitochondria, gene expression does not take place, while glycolysis is the only mechanism to produce ATP. This simplicity makes its ...
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Bacterial organisms like Escherichia coli have developed mechanisms to detect and direct cell movement toward substrate when starved. Such behavior is known as chemotaxis (15 for recent review). Some ...
Hsp70-Mediated Protein Refolding in E-Cell
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In this work, we used E‑Cell, a software package aiming at large‑scale modeling with full object‑oriented modeling support, to analyze the 70kDa heat shock protein (Hsp70) chaperone ...
Whole Cell Modeling—Fundamental Basis and Applications
Pawan Dhar
An offshoot of classical bioinformatics, whole cell modeling integrates information from metabolic pathways, gene regulation and expression. This new area of in‑silico biology converges discipli...
