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Apoptosis

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Microautophagy of the Saccharomyces cerevisiae Nucleus

David S. Goldfarb

Portions of the Saccharomyces cerevisiae nucleus are targeted to the vacuole and degraded by “piecemeal microautophagy of the nucleus” (Pmn). During Pmn small teardrop-like nuclear envelope blebs are engulfed by invaginations of the vacuole membrane, pinched into the vacuole lumen, and degrad...

Mitochondrial/Apoptosome Dependent Activation of Caspases

Kelvin Cain

Many key biological processes, including caspase activation during apoptotic cell death are executed by large multi-protein complexes. Apoptosis can be initiated via death receptors or by perturbation of the mitochondria, which results in the release of apoptogenic proteins. These initia...

Modulation of Caspase Activity by Cellular Inhibitors

Klaus W. Wagner, Badry D. Bursulaya and Quinn L. Deveraux

Caspases are key effectors of the apoptosis process, therefore it is not surprising that mammals, as well as other species, evolved molecules that regulate caspases by directly binding and inhibiting them. Yet the IAPs are the only endogenous cellular caspase inhibitors identified to dat...

Other Methods of Caspase Activity Monitoring

Hubert Hug, Christof Burek and Marek Los

Caspases (Cysteine-Aspart-ases) are important effector molecules involved in apoptosis, though some of them can also participate in other physiological processes such as activation of proinflammatory cytokines and/or possibly regulation of cell activation and prolife...

Programmed cell death & trypanosomatids: A brief review

Maria de Nazaré C. Soeiro

The phenomenon of apoptosis, one type of programmed cell death, is reviewed in three vector-borne trypanosomatids (Trypanosoma cruzi, Trypanosoma brucei and Leishmania spp) responsible for diseases of great medical and veterinary importance. Although some cytoplasmatic and nuclear apoptotic-like fea...

Programmed Cell Death and the Enteric Protozoan Parasite Blastocystis hominis :Perspectives and Prospects

Kevin Tan

The propensity for unicellular eukaryotes to undergo programmed cell death (PCD) has been well documented in recent years. This fascinating yet somewhat counterintuitive phenomenon has been reported to occur for many species of the parasitic Protozoa. Among the luminal Protozoa, PCD in Blastocystis ...

Programmed Cell Death During Malaria Parasite Infection of the Vertebrate Host and Mosquito Vector

Luke Baton, Emma Warr, Seth Hoffman and George Dimopoulos

In recent years, there has been an increasing awareness of the role of programmed cell death (PCD) in the malaria parasite’s infection of its vertebrate host and mosquito vector. Although the evidence that PCD occurs within malaria parasites themselves is currently limited and controversial, a sig...

Programmed cell death in African Trypanosomes

Katherine Figarella, Néstor L. Uzcátegui, Viola Denninger, Susan Welburn and Michael Duszenko

Since the discovery of programmed cell death in multicellular organisms and due to its definition as a mechanism to maintain the individual haemostasis of cellular and organ integrity, it was not plausible to think that such a phenomenon could also occur in unicellular organisms. However, during the...

Programmed Cell Death in Dinoflagellates

Maria Segovia

Dinoflagellates are unicellular flagellated eukaryotes exploiting different nutritional modes although approximately half of them are photosynthetic. They are a monophyletic group, included in the lineage Alveolates. Dinoflagellates are ecologically important as components of the phytoplankton, and ...

Programmed Cell Death in Protists without Mitochondria:The Missing Link

Claude-Olivier Sarde and Alberto Roseto

Programmed cell death (PCD), a fundamental process that can be triggered in all cells, was supposed until recently solely centred on the mitochondrion. However, in amitochondriate organisms where only hydrogenosomes and mitosomes subsist as mitochondria relics, recent findings show that PCD still oc...

Programmed Cell Death in Protozoa: An Evolutionary Point of View
The Example of Kinetoplastid Parasites

Miguel A. Fuerte, Paul A. Nguewa, Josefina Castilla, Carlos Alonso and José M. Pérez

Programmed cell death (PCD) is a molecular event, which play an essential role in the development of multicellular organisms. However, recent studies indicate that PCD is a mechanism also present in protozoa and unicellular eukaryotes. For instance, it has been recently proposed that some Trypanosom...

Programmed Nuclear Death and Other Like-Apoptotic Phenomena in Ciliated Protozoa

Silvia Díaz, Ana Martín González, Andrea Gallego and Juan Carlos-Gutierrez

One of the more usual hallmarks of programmed cell death (PCD) in multicellular organisms is the nuclear chromatin condensation and the DNA fragmentation in multiple oligonucleosome length fragments. In Tetrahymena thermophila and other free-living ciliated protozoa, a controlled nuclear degradation...

Regulation of Autophagy by the Target of Rapamycin (Tor) Proteins

Hagai Abeliovich

Administration of the small macrolide antibiotic rapamycin to eukaryotic cells results in physiological responses that mimic nutrient starvation, and in many ways resembles nitrogen starvation. The target for rapamycin action in these cells is a family of conserved kinases known as TOR (target of...

Regulation of Mammalian Autophagy by Protein Phosphorylation

Michael T.N. Møller, Hamid R. Samari, Lise Holden and Per O. Seglen

Mammalian autophagy is subject to regulation by a variety of protein kinases and phosphatases. Long-term control of autophagic capacity seems to be mediated by transcriptional effect(s) of eIF2• kinases, whereas a signaling pathway initiated by the AMP-activated protein kinase (AMPK) and its up...

Role of Autophagy in Developmental Cell Growth and Death: Insights from Drosophila

Thomas P. Neufeld

During development in Drosophila, larvae increase in mass by 1,000-fold over the course of a few days. This high rate of growth is controlled by TOR, a potent regulator of both protein synthesis and autophagy. At metamorphosis, most larval tissues are histolyzed through autophagy-mediated cell de...

Selective Degradation of Peroxisomes in the Methylotrophic Yeast Hansenula polymorpha

Jan Kiel and Marten Veenhuis

Peroxisomes are ubiquitous organelles, morphologically characterized by a single membrane that encloses a proteinaceous matrix. These organelles are inducible in nature, and their functional diversity is unprecedented. Their importance is probably best illustrated by the existence of peroxisomal ...

Signaling Pathways in Mammalian Autopathy

Patrice Codogno and Alfred J. Meijer

Macroautophagy is a major catabolic process conserved from yeast to human. The formation of autophagic vacuoles is stimulated by a variety of intracellular and extracellular stress situations including amino acid starvation, aggregation of misfolded proteins, and accumulation of damaged organelle...

Structural Aspects of Mammalian Autophagy

Monica Fengsrud, Marianne Lunde Sneve, Anders Øverbye and Per O. Seglen

The initial event in mammalian autophagy, triggered, for example, by amino acid starvation, is the sequestration and enclosure of a piece of cytoplasm by one or more specialized membrane cisternae of uncertain origin, called phagophores. The resulting cytoplasm-filled vacuolar organelle, known as...

The Caspase Family

Mohamed Lamkanfi, Wim Declercq, Bart Depuydt, Michael Kalai, Xavier Saelens and Peter Vandenabeele

Caspases, a family of cysteinyl aspartate-specific proteases, are central mediators of apoptotic and inflammatory pathways. Caspases are synthesized as zymogens with a prodomain of variable length followed by a large subunit (p20) and small subunit (p10). The large prodomains contain protein recruit...

The Role of Caspases in Modulation of Cytokines and other Molecules in Apoptosis and Inflammation

Harald Loppnow, Krzysztof Guzik and Juliusz Pryjma

Caspases are a large family of evolutionary conserved proteases. The first caspase, has been identified as the enzyme necessary for functional maturation of IL-1b.1,2 This molecule, initially named interleukin-1b-converting...

Trafficking of Bacterial Pathogens to Autophagosomes

William A. Dunn, Jr., Brian R. Dorn and Ann Progulske-Fox

Bacteria have evolved a variety of mechanisms to subvert the eukaryotic defenses and survive intracellularly. Many bacterial pathogens have been shown to establish an intracellular niche for survival and replication by lysing the phagosome and entering the cytosol, by suppressing the maturation o...

Ubiquitin-Mediated Vacuolar Sorting and Degradation

David J. Katzmann

Protein sorting within the endosomal system can yield several outcomes. One outcome is sorting into the intralumenal vesicles of a multivesicular body (MVB). MVB formation is required for a number of important cellular functions. It has been appreciated for some time that some cell surface recept...

Vacuolar Import and Degradation

C. Randell Brown and Hui-Ling Chiang

The gluconeogenic enzyme fructose-1,6-bisphosphatase is rapidly degraded in yeast cells following a shift from low glucose conditions to high glucose conditions. Although the site of degradation has been controversial, research from our lab and others indicates that a significant portion of FBPas...

Virus-Encoded Caspase Inhibitors

Grant McFadden and Richard W. Moyer

There have been many excellent reviews on caspase structure and function16 and key features will only briefly be discussed here to set the framework for our discussion of virus encoded caspase inhibitors. Caspases (Cysteine-dependent Aspartate Specific Proteases)7 a...


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